Use Cases

Torrent Suite Software space on Ion Community

Add or Change an Ion PGM, Ion Proton, or Ion S5sequencer

Do not add or change an Ion PGM, Ion Proton , or Ion S5 s equencer through the Site administration Rigs configuration item. During initial setup,Ion sequencers automatically register themselves with the Torrent Browser.Changes to an Ion PGM , Ion Proton , or Ion S5 s equencer are also communicated directly to the Torrent Browser.

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Never delete a Rig using the Site administration Rigs configuration item. That action could corrupt the database.

The Site administration Rigs configuration item is not to be used:

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Refer to Manage Sequencer Settings from the Torrent Browser to configure an Ion PGM , Ion Proton , or Ion S5 s equencer from the Torrent Browser.

Contents

Introduction

Realign Run to Different Reference Genome

Reanalyze with a Different DNA Barcode Set

Use DNA Barcodes with the Ion Torrent™ Sequencers

Overview of the BaseCaller and Barcode Classification

Troubleshooting Barcode Classification Issues

Custom Barcode Design

Scan Your Sequencing Kit

Handle a Failed Analysis Run

Determine the Fault Cause

Restart a Run

Terminate an Analysis Run

Work with Files

Work with the Database

Change the Report Name

Change the Run Date

Add or Change an Ion PGM™ or Ion Proton™ Instrument

Change Your Torrent Browser Password