Use Cases
Torrent Suite Software space on Ion Community
Scan Your Sequencing Kit
Scanning sequencing kits is a part of the Personal Genome Machine ( Ion PGM) and Ion Proton instrument setup workflow. The Torrent Browser template wizard (under the Plan tab) also supports specifying the sequencing kit when you create a template or a planned run.
Here is an example of the kit scanning page and keyboard during the Ion PGM system setup:
The choice of sequencing kit affects thenucleotide flows on the Ion sequencer.
The template wizard
Enter the sequence kit in the Torrent Browser template wizard, under the Kits chevron:
The visual reminder in the planned run helps prevent error on instrument.
Introduction
Realign Run to Different Reference Genome
Reanalyze with a Different DNA Barcode Set
Use DNA Barcodes with the Ion Torrent™ Sequencers
Overview of the BaseCaller and Barcode Classification
Troubleshooting Barcode Classification Issues
Custom Barcode Design
Scan Your Sequencing Kit
Handle a Failed Analysis Run
Determine the Fault Cause
Restart a Run
Terminate an Analysis Run
Work with Files
Work with the Database
Change the Report Name
Change the Run Date
Add or Change an Ion PGM™ or Ion Proton™ Instrument
Change Your Torrent Browser Password