Use Cases

---

Torrent Suite Software space on Ion Community

Use Cases TOC

Realign a Run to a Different Reference Genome

This section describes how to rerun an analysis with alignment to a different reference genome.

1. Log in to Torrent Browser and click the Data tab Completed Runs & Reports page.
   
   
   
   Go to the Data > Completed Runs & Reports tab and find your run name.
   
   
   
   
   
   
   
   In the table view, click the Reanalyze option in the gear menu on the right of the run entry:

   

   In the list view, click the Reanalyze button on the right of the run entry:

   

   The main run analysis dialog opens:

   

2. Click the Advanced button to display the additional run parameter options:

   
   
   
   
   

3. Click the Alignment Reference pull-down menu and select the reference for this run:
   
   
   
   
   
   This menu shows the references available in your Torrent Browser. Your list is different from the list shown here.
   
   
   
   
4. ( Optional ) Change other advanced options if required. (See Work with Completed Runs for a description of the Advanced fields.)
   
   
   
   
5. Click the Start Analysis button.

---