Torrent Browser Analysis Report Guide
Torrent Suite Software space on Ion Community
Run Report Metrics
This section provides background information on run metrics and detailed descriptions of a run report. See Run Metrics Overview for explanations of quality metrics, read length calculations, and alignment.
Run Metrics Overview
Run Report Metrics Before Alignment
Run Report Metrics on Aligned Reads
For analyses that are members of a project, you can download a CSV file of run metrics. See Project Result Sets Page and CSV Metrics File Format .
Torrent Browser Analysis Report Guide
Run Report Metrics
Run Metrics Overview
Run Report Metrics Before Alignment
Run Report Metrics on Aligned Reads
Barcode Reports
Test Fragment Report
Report Information
Output Files
Plugin Summary
Assembler SPAdes Plugin
Coverage Analysis Plugin
ERCC Analysis Plugin
FileExporter Plugin
FilterDuplicates Plugin
IonReporterUploader Plugin
See
The Ion Reporter™ Software Integration Guide
Run RecognitION Plugin
SampleID Plugin
TorrentSuiteCloud Plugin
Torrent Variant Caller Plugin
Torrent Variant Caller Parameters
Example Torrent Variant Caller Parameter File
Torrent Variant Caller Output
The Command-Line Torrent Variant Caller
Ion Reporter™ Software Features Related to Variant Calling
Integration with TaqMan® and PCR