Torrent Browser Analysis Report Guide
Torrent Suite Software space on Ion Community
The Partek FlowUploader Plugin
This plugin requires a separate purchase of Partek Flow Software, which is a third party software that is not supported by Ion Torrent.
Run the plugin automatically
You set up the plugin to run automatically when you configure your template or run plan. In the Plugin chevron of the template wizard, you select which plugins run automatically on planned runs created from that template. See the Templates page in the Torrent Browser User Interface Guide .
Run the plugin manually
You can launch the plugin manually from a completed run report.
Follow these steps to run the plugin manually:
-
Open the run report and scroll down to the Plugin Summary button. Click
Select plugins to run
.
-
In the
Select a plugin
list, click
PatekFlowUplpoader
.
-
In the plugin export page, enter your
Partek Flow Software information and click
Export to Partek Flow
:
Torrent Browser Analysis Report Guide
Run Report Metrics
Run Metrics Overview
Run Report Metrics Before Alignment
Run Report Metrics on Aligned Reads
Barcode Reports
Test Fragment Report
Report Information
Output Files
Plugin Summary
Assembler SPAdes Plugin
Coverage Analysis Plugin
ERCC Analysis Plugin
FileExporter Plugin
FilterDuplicates Plugin
IonReporterUploader Plugin
See
The Ion Reporter™ Software Integration Guide
Run RecognitION Plugin
SampleID Plugin
TorrentSuiteCloud Plugin
Torrent Variant Caller Plugin
Torrent Variant Caller Parameters
Example Torrent Variant Caller Parameter File
Torrent Variant Caller Output
The Command-Line Torrent Variant Caller
Ion Reporter™ Software Features Related to Variant Calling
Integration with TaqMan® and PCR