Torrent Browser User Interface Guide
Torrent Suite Software space on Ion Community
TMAP mapvsw Options
This page describes the parameters for the TMAP
mapvsw
module. The
map
vsw
module implements a
vectorized implementation of Smith-Waterman.
Options supported with the TMAP
map
vsw
module(all are optional):
| Option | Type | Default | Description |
|---|---|---|---|
| --min-seq-length | INT | -1 | The minimum sequence length to examine (-1 to disable) |
| --max-seq-length | INT | -1 | The maximum sequence length to examine(-1 to disable) |
Torrent Browser User Interface Guide
The Login Page
The Plan Tab
Templates
Planned Runs
Plan by Sample Set
Create Samples and a Sample Set
Sample Attributes
Template and Planned Run Wizard
Create Multiple Run Plans
Create a Template with Ion AmpliSeq.com Import
The Monitor Tab
The Data Tab
Completed Runs and Reports Tab
Work with Completed Runs
Reanalyze a Completed Run
BaseCaller Parameters
TMAP Parameters
The Projects Listing Page
Project Result Sets Page
Compare Multiple Run Reports
CSV Metrics File Format