Torrent Suite SoftwareAdministrator Documentation

Welcome to the Torrent Suite Software Administrator Documentation home page. Administrator documentation is divided into these guides:

The References Management Guide covers these topics:

Overview	References Management Guide
Reference files	Upload a New Reference File Delete a Reference Sequence Download an Ion Reference File
BED files	Target Regions Files and Hotspot Files Manage Target Regions Files and Hotspot Files BED File Formats and Examples
DNA barcodes	Manage DNA Barcodes and DNA Barcode Sets
Reference library indexes	Update Reference Library Indices
Other	Details about the Ion hg19 Reference Work with Obsolete Reference Sequences Work with Test Fragments

The Data Management Guide covers these topics:

Overview	Data Management Overview
Configuration	Data Management Configuration Steps to Configure Data Management for your Torrent Server Archive Locations Disk Full Notifications Permission for Automatic Deletion (Auto-Acknowledge) File Age and Disk Space Thresholds Data Management Categories of Analysis Files Email Notifications (recommended) Protect Analysis Files From Being Deleted or Archived Examples of Configured File Categories Rules Off-release Cycle Product Updates Settings After an Upgrade from 3.4 or Earlier Version Data Management File Categories Details
Check settings for a specific analysis	Check Data Management Settings for an Analysis
Automatic actions	Data Management Configuration How Do Automatic File Deletion and Archiving Work?
Delete files	Delete Analysis Files
Archive or export	Archive or Export Analysis Files Archive or Export a Specific Run Archive or Export Members of a Project LocateArchived or Exported Data Add an Archive Location Archive Disk Space Differences Between Archive and Export
Reanalyze an archived run	Reanalyze Archived Data
Import an archived or exported run	Import Analysis Files

The Administration Guide covers these main topics:

Administration	Administration Guide Introduction page
Deploy Your System	Site Preparation Network Connectivity Server Configuration Verify Functionality
Maintain Your System	Monitor Your Torrent Server Monitor Free Disk Space See also The Data Management Guide Mount a USB Drive Boot Into Single-User Mode Install and Use a UPS Axeda® Remote System Monitoring (RSM)
Administration	Configure Chips Configure Experiments Configure Global Configs Configure Users Approve User Account Requests Configure Basecaller Default Parameters Configure LIMS Metadata export from Planned Runs
Management Actions	View Network Settings Shutdown Server Use a Torrent VM to Evaluate a New Torrent Suite Software Release Update Server Update the Ion One Touch™ Device
Troubleshooting	Troubleshooting The Customer Support Archive